GRMZM2G098063's detail annotation

1.Annotation (Gramene)

not available!

2.Location

ChromosomeStrandRegionStartEndUCSC
1+gene254460346254462461LINK

3.Sequences

Gene:
Promoter(up TSS 3kb):
Transcript:
CDS:
Protein:

4.Chromatin states

States in Promoter (2kb)States in GenebodyStates in Downstream (2kb)
E23,E16,E23,E26,E11,E23,E11,E13,E6,E2,E13,E6,E11,E25,E25,E11,E23,E13,E6,E3,E6,E13,

5.Protein domain

Protein IDPfam AccessionPfam AnnotationAlignment StartAlignment StartE-value
GRMZM2G098063_P01PF02362.18B3281146.10E-16
GRMZM2G098063_P01PF02362.18B32373233.80E-14

6.Blast top3 hits

SpeciesGene IDBlast Evalue
Arabidopsis thalianaAT4G332804.00E-10
Arabidopsis thalianaAT1G494802.00E-09
Arabidopsis thalianaAT3G189903.00E-09
Oryza sativeLOC_Os03g423702.00E-69
Oryza sativeLOC_Os03g424104.00E-61
Oryza sativeLOC_Os03g422801.00E-26

7.Heuristic function module

CategoryFamily
GOGO:0003677
GOGO:0006355
Subcellular locationmitochondrion
Subcellular locationnucleus

8.Predicted function module

CategoryFamily
B73 Global RNA-seq networkB73RALLCFM11
B73 biotic stress conditional networkBIOTICCFM19
B73 tissue specific conditional networkTISSUECFM1
B73 leaf section conditional networkSRP018823CFM1

9.Expression pattern