| Annotation: Putative MYB DNA-binding domain superfamily protein |
| Chromosome | Strand | Region | Start | End | UCSC |
|---|---|---|---|---|---|
| 4 | + | gene | 82918804 | 82920269 | LINK |
| Gene: |
| >GRMZM2G111117 |
| Promoter(up TSS 3kb): |
| >GRMZM2G111117_promoter |
| Transcript: |
| >GRMZM2G111117_T01 |
| CDS: |
| >GRMZM2G111117_T01 |
| Protein: |
| >GRMZM2G111117_P01 |
| States in Promoter (2kb) | States in Genebody | States in Downstream (2kb) | |||
|---|---|---|---|---|---|
| E24,E1,E11,E3,E2, | E2,E1,E24,E2, | E24,E1,E24, | |||
| Protein ID | Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | E-value |
|---|---|---|---|---|---|
| GRMZM2G111117_P01 | PF00249.28 | Myb_DNA-binding | 14 | 61 | 7.50E-17 |
| GRMZM2G111117_P01 | PF00249.28 | Myb_DNA-binding | 67 | 112 | 7.90E-17 |
| Species | Gene ID | Blast Evalue |
|---|---|---|
| Arabidopsis thaliana | AT5G15310 | 1.00E-89 |
| Arabidopsis thaliana | AT3G01140 | 2.00E-88 |
| Arabidopsis thaliana | AT4G05100 | 4.00E-72 |
| Oryza sative | LOC_Os08g33660 | 1.00E-174 |
| Oryza sative | LOC_Os02g36890 | 2.00E-88 |
| Oryza sative | LOC_Os04g38740 | 5.00E-87 |
| Category | Family |
|---|---|
| GO | GO:0003677 |
| GO | GO:0003682 |
| GO | GO:0010091 |
| GO | GO:0009651 |
| GO | GO:0009751 |
| GO | GO:0000902 |
| GO | GO:0046686 |
| GO | GO:0009739 |
| GO | GO:0009733 |
| GO | GO:0009723 |
| GO | GO:0009753 |
| Subcellular location | nucleus |
| Category | Family |
|---|---|
| B73 Global RNA-seq network | B73RALLCFM25 |
| B73 Global RNA-seq network | B73RALLCFM452 |
| B73 abiotic stress conditional network | ABIOTICCFM181 |
| B73 tissue specific conditional network | TISSUECFM110 |
| B73 maize development conditional network | SRP010680CFM9 |
| B73 maize embryo and endosperm conditional network | SRP037559CFM83 |
| Mo17 tissue specific network | MO17RALLCFM132 |
| Mo17 tissue specific network | MO17RALLCFM446 |