GRMZM2G318213's detail annotation

1.Annotation (Gramene)

Annotation: Grx_C15-glutaredoxin subgroup III

2.Location

ChromosomeStrandRegionStartEndUCSC
6-gene132453961132454760LINK

3.Sequences

Gene:
Promoter(up TSS 3kb):
Transcript:
CDS:
Protein:

4.Chromatin states

States in Promoter (2kb)States in GenebodyStates in Downstream (2kb)
E26,E23,E1,E11,E3,E4E4,E5,E4,E3E3,E11,E23,E25,E24

5.Protein domain

Protein IDPfam AccessionPfam AnnotationAlignment StartAlignment StartE-value
GRMZM2G318213_P01PF00462.21Glutaredoxin38924.50E-08

6.Blast top3 hits

SpeciesGene IDBlast Evalue
Arabidopsis thalianaAT5G119302.00E-25
Arabidopsis thalianaAT4G330402.00E-22
Arabidopsis thalianaAT1G284806.00E-19
Oryza sativeLOC_Os05g109303.00E-47
Oryza sativeLOC_Os01g098304.00E-44
Oryza sativeLOC_Os01g271408.00E-18

7.Heuristic function module

CategoryFamily
GOGO:0015035
GOGO:0009055
GOGO:0045454
Subcellular locationcytosol
Subcellular locationendoplasmic reticulum
Subcellular locationextracellular
Subcellular locationgolgi
Subcellular locationvacuole

8.Predicted function module

CategoryFamily
B73 maize kernal conditional networkGSE62778CFM13
B73 maize kernal conditional networkGSE62778CFM389
B73 maize kernal conditional networkGSE62778CFM472
B73 leaf section conditional networkSRP018823CFM36

9.Expression pattern