GRMZM2G388776's detail annotation

1.Annotation (Gramene)

Annotation: Putative leucine-rich repeat receptor-like protein kinase family protein

2.Location

ChromosomeStrandRegionStartEndUCSC
10+gene98435129844082LINK

3.Sequences

Gene:
Promoter(up TSS 3kb):
Transcript:
CDS:
Protein:

4.Chromatin states

States in Promoter (2kb)States in GenebodyStates in Downstream (2kb)
E14,E21,E25,E21,E20,E25,E11,E11,E11,E25,E16,E26,E23,E18,E11,E25,

5.Protein domain

Protein IDPfam AccessionPfam AnnotationAlignment StartAlignment StartE-value
GRMZM2G388776_P01PF07714.14Pkinase_Tyr23637.20E-06

6.Blast top3 hits

SpeciesGene IDBlast Evalue
Arabidopsis thalianaAT3G475803.00E-17
Arabidopsis thalianaAT3G475701.00E-16
Arabidopsis thalianaAT3G242401.00E-16
Oryza sativeLOC_Os11g471808.00E-51
Oryza sativeLOC_Os11g469601.00E-50
Oryza sativeLOC_Os06g160702.00E-49

7.Heuristic function module

CategoryFamily
GOGO:0016772
GOGO:0004672
GOGO:0016301
GOGO:0016310
GOGO:0006468
Subcellular locationendoplasmic reticulum
Subcellular locationextracellular
Subcellular locationgolgi
Subcellular locationvacuole

8.Predicted function module

CategoryFamily
nullnull

9.Expression pattern