| Annotation: Hsp20/alpha crystallin family protein |
| Chromosome | Strand | Region | Start | End | UCSC |
|---|---|---|---|---|---|
| 5 | + | gene | 32938919 | 32940098 | LINK |
| Gene: |
| >GRMZM2G465723 |
| Promoter(up TSS 3kb): |
| >GRMZM2G465723_promoter |
| Transcript: |
| >GRMZM2G465723_T01 |
| CDS: |
| >GRMZM2G465723_T01 |
| Protein: |
| >GRMZM2G465723_P01 |
| States in Promoter (2kb) | States in Genebody | States in Downstream (2kb) | |||
|---|---|---|---|---|---|
| E17,E31,E30,E31,E24,E1,E24,E1,E11, | E11,E3,E2,E1,E2, | E2,E1,E2, | |||
| Protein ID | Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | E-value |
|---|---|---|---|---|---|
| GRMZM2G465723_P01 | PF00011.18 | HSP20 | 30 | 105 | 9.10E-12 |
| Species | Gene ID | Blast Evalue |
|---|---|---|
| Arabidopsis thaliana | AT2G27140 | 7.00E-07 |
| Arabidopsis thaliana | AT4G10250 | 2.00E-05 |
| Arabidopsis thaliana | AT5G20970 | 0.002 |
| Oryza sative | LOC_Os10g30180 | 5.00E-29 |
| Oryza sative | LOC_Os03g45330 | 3.00E-07 |
| Oryza sative | LOC_Os05g51440 | 9.00E-06 |
| Category | Family |
|---|---|
| Subcellular location | cytosol |
| Subcellular location | mitochondrion |
| Subcellular location | nucleus |
| Category | Family |
|---|---|
| B73 Global RNA-seq network | B73RALLCFM57 |
| B73 biotic stress conditional network | BIOTICCFM23 |
| B73 abiotic stress conditional network | ABIOTICCFM71 |
| B73 tissue specific conditional network | TISSUECFM49 |
| B73 maize kernal conditional network | GSE62778CFM104 |
| B73 maize kernal conditional network | GSE62778CFM378 |
| B73 leaf section conditional network | SRP018823CFM32 |
| B73 leaf section conditional network | SRP018823CFM89 |
| Mo17 tissue specific network | MO17RALLCFM54 |
| Mo17 tissue specific network | MO17RALLCFM55 |