GRMZM6G557089's detail annotation

1.Annotation (Gramene)

not available!

2.Location

ChromosomeStrandRegionStartEndUCSC
scaffold_469+gene3842016LINK

3.Sequences

Gene:
Promoter(up TSS 3kb):
Transcript:
CDS:
Protein:

4.Chromatin states

States in Promoter (2kb)States in GenebodyStates in Downstream (2kb)

5.Protein domain

Protein IDPfam AccessionPfam AnnotationAlignment StartAlignment StartE-value
GRMZM6G557089_P01PF00888.19Cullin11173.10E-09

6.Blast top3 hits

SpeciesGene IDBlast Evalue
Arabidopsis thalianaAT4G025702.00E-08
Arabidopsis thalianaAT1G431404.00E-07
Arabidopsis thalianaAT1G597908.00E-07
Oryza sativeLOC_Os01g709205.00E-42
Oryza sativeLOC_Os01g271502.00E-09
Oryza sativeLOC_Os05g057003.00E-09

7.Heuristic function module

CategoryFamily
GOGO:0031625
GOGO:0031461
GOGO:0006511
Subcellular locationcytosol
Subcellular locationnucleus
Subcellular locationplastid

8.Predicted function module

CategoryFamily
B73 abiotic stress conditional networkABIOTICCFM405
B73 maize kernal conditional networkGSE62778CFM266
B73 maize kernal conditional networkGSE62778CFM562
B73 maize kernal conditional networkGSE62778CFM636
B73 maize kernal conditional networkGSE62778CFM735
B73 maize kernal conditional networkGSE62778CFM787
B73 maize development conditional networkSRP010680CFM219

9.Expression pattern