| Category | Annotation | p-value | q-value |
|---|
| GO:0009535 | chloroplast thylakoid membrane,GOslim:cellular_component | 1.38E-26 | 1.08E-23 |
| GO:0009579 | thylakoid,GOslim:cellular_component | 7.78E-19 | 3.03E-16 |
| GO:0009507 | chloroplast,GOslim:cellular_component | 1.31E-17 | 3.41E-15 |
| GO:0009522 | photosystem I,GOslim:cellular_component | 2.99E-17 | 5.83E-15 |
| zma00195 | Photosynthesis | 7.35E-16 | 1.15E-13 |
| GO:0009538 | photosystem I reaction center,GOslim:cellular_component | 4.11E-15 | 4.58E-13 |
| zma_M00611 | Oxygenic photosynthesis in plants and cyanobacteria | 2.23E-12 | 2.17E-10 |
| GO:0009534 | chloroplast thylakoid,GOslim:cellular_component | 4.74E-12 | 4.10E-10 |
| GO:0009941 | chloroplast envelope,GOslim:cellular_component | 5.28E-12 | 4.11E-10 |
| GO:0010287 | plastoglobule,GOslim:cellular_component | 1.23E-10 | 8.72E-09 |
| zma_M00166 | Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P | 9.79E-07 | 6.36E-05 |
| GO:0006006 | glucose metabolic process,GOslim:biological_process | 2.31E-06 | 0.000138835 |
| GO:0016020 | membrane,GOslim:cellular_component | 2.77E-06 | 0.000154401 |
| GO:0009543 | chloroplast thylakoid lumen,GOslim:cellular_component | 3.67E-06 | 0.000190609 |
| zma_M00165 | Reductive pentose phosphate cycle (Calvin cycle) | 4.07E-06 | 0.000198409 |
| pathwayID:GLUCONEO-PWY | gluconeogenesis I | 1.08E-05 | 0.00049307 |
| GO:0015976 | carbon utilization,GOslim:biological_process | 2.18E-05 | 0.000943561 |
| GO:0010319 | stromule,GOslim:cellular_component | 2.31E-05 | 0.000948273 |
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor,GOslim:molecular_function | 2.45E-05 | 0.000953167 |
| GO:0010598 | NAD(P)H dehydrogenase complex (plastoquinone),GOslim:cellular_component | 2.90E-05 | 0.001077649 |
| zma00710 | Carbon fixation in photosynthetic organisms | 5.80E-05 | 0.00196735 |
| GO:0004089 | carbonate dehydratase activity,GOslim:molecular_function | 5.69E-05 | 0.00196735 |
| GO:0010206 | photosystem II repair,GOslim:biological_process | 6.82E-05 | 0.002128163 |
| GO:0050661 | NADP binding,GOslim:molecular_function | 6.82E-05 | 0.002128163 |
| pathwayID:PWY-6527 | stachyose degradation | 9.52E-05 | 0.002855465 |
| GO:0051287 | NAD binding,GOslim:molecular_function | 0.000105569 | 0.003048435 |
| GO:0009773 | photosynthetic electron transport in photosystem I,GOslim:biological_process | 0.000157572 | 0.004387614 |
| pathwayID:CYANCAT-PWY | cyanate degradation | 0.000195422 | 0.005078774 |
| pathwayID:CALVIN-PWY | Calvin-Benson-Bassham cycle | 0.000193609 | 0.005078774 |
| GO:0009570 | chloroplast stroma,GOslim:cellular_component | 0.000305266 | 0.007677561 |
| GO:0009765 | photosynthesis, light harvesting,GOslim:biological_process | 0.000386757 | 0.009423127 |
| GO:0048046 | apoplast,GOslim:cellular_component | 0.000632712 | 0.014948527 |
| pathwayID:PWYQT-4436 | UDP-galactose biosynthesis | 0.000957844 | 0.021964546 |
| GO:0009817 | defense response to fungus, incompatible interaction,GOslim:biological_process | 0.001092391 | 0.023018799 |
| pathwayID:ANAGLYCOLYSIS-PWY | glycolysis III | 0.001068463 | 0.023018799 |
| pathwayID:GLYCOLYSIS | glycolysis I | 0.001037069 | 0.023018799 |
| pathwayID:PWY-1042 | glycolysis IV (plant cytosol) | 0.001133042 | 0.023247093 |
| GO:0000413 | protein peptidyl-prolyl isomerization,GOslim:biological_process | 0.001335603 | 0.02670048 |
| pathwayID:PWY-6317 | galactose degradation I (Leloir pathway) | 0.001773529 | 0.034568835 |
| pathwayID:PWY-6510 | methanol oxidation to formaldehyde II | 0.002064607 | 0.037434772 |
| GO:0009512 | cytochrome b6f complex,GOslim:cellular_component | 0.002064607 | 0.037434772 |
| GO:0031679 | NADH dehydrogenase (plastoquinone) activity,GOslim:molecular_function | 0.002064607 | 0.037434772 |
| pathwayID:GALACTMETAB-PWY | UDP-galactose biosynthesis (salvage pathway from galactose using UDP-glucose) | 0.002270656 | 0.04023509 |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity,GOslim:molecular_function | 0.002472145 | 0.042831945 |
| pathwayID:COLANSYN-PWY | colanic acid building blocks biosynthesis | 0.002973858 | 0.04925156 |
| GO:0010037 | response to carbon dioxide,GOslim:biological_process | 0.00309535 | 0.04925156 |
| GO:0030093 | chloroplast photosystem I,GOslim:cellular_component | 0.00309535 | 0.04925156 |
| GO:0009780 | photosynthetic NADP+ reduction,GOslim:biological_process | 0.00309535 | 0.04925156 |
