| Category | Annotation | p-value | q-value |
|---|
| GO:0009579 | thylakoid,GOslim:cellular_component | 1.28E-07 | 5.01E-05 |
| GO:0031977 | thylakoid lumen,GOslim:cellular_component | 2.45E-07 | 5.01E-05 |
| GO:0048046 | apoplast,GOslim:cellular_component | 5.63E-07 | 7.68E-05 |
| GO:0009941 | chloroplast envelope,GOslim:cellular_component | 2.08E-06 | 0.000213096 |
| GO:0009570 | chloroplast stroma,GOslim:cellular_component | 2.90E-06 | 0.000220641 |
| zma_M00532 | Photorespiration | 3.24E-06 | 0.000220641 |
| GO:0016984 | ribulose-bisphosphate carboxylase activity,GOslim:molecular_function | 4.83E-06 | 0.000282557 |
| GO:0015977 | carbon fixation,GOslim:biological_process | 1.15E-05 | 0.000524701 |
| pathwayID:NONMEVIPP-PWY | methylerythritol phosphate pathway | 1.15E-05 | 0.000524701 |
| GO:0009535 | chloroplast thylakoid membrane,GOslim:cellular_component | 3.36E-05 | 0.001056624 |
| GO:0010218 | response to far red light,GOslim:biological_process | 3.05E-05 | 0.001056624 |
| GO:0010114 | response to red light,GOslim:biological_process | 3.35E-05 | 0.001056624 |
| GO:0009637 | response to blue light,GOslim:biological_process | 2.91E-05 | 0.001056624 |
| plastid | plastid | 5.78E-05 | 0.0016895 |
| GO:0016491 | oxidoreductase activity,GOslim:molecular_function | 7.02E-05 | 0.00191495 |
| zma00710 | Carbon fixation in photosynthetic organisms | 8.78E-05 | 0.002246495 |
| pathwayID:PWY-5723 | Rubisco shunt | 0.00015089 | 0.003631841 |
| pathwayID:CALVIN-PWY | Calvin-Benson-Bassham cycle | 0.00019974 | 0.004540551 |
| GO:0055114 | oxidation-reduction process,GOslim:biological_process | 0.000275673 | 0.005831592 |
| GO:0009507 | chloroplast,GOslim:cellular_component | 0.000285037 | 0.005831592 |
| GO:0046554 | malate dehydrogenase (NADP+) activity,GOslim:molecular_function | 0.000403353 | 0.007859266 |
| zma00195 | Photosynthesis | 0.000434607 | 0.00808332 |
| GO:0016829 | lyase activity,GOslim:molecular_function | 0.000508645 | 0.009049048 |
| GO:0080158 | chloroplast ribulose bisphosphate carboxylase complex biogenesis,GOslim:biological_process | 0.000604976 | 0.010314377 |
| GO:0045157 | electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity,GOslim:molecular_function | 0.000806563 | 0.013201237 |
| GO:0004497 | monooxygenase activity,GOslim:molecular_function | 0.000861682 | 0.013560939 |
| GO:0022626 | cytosolic ribosome,GOslim:cellular_component | 0.001429262 | 0.019494262 |
| GO:0009409 | response to cold,GOslim:biological_process | 0.001409731 | 0.019494262 |
| GO:0004324 | ferredoxin-NADP+ reductase activity,GOslim:molecular_function | 0.001411112 | 0.019494262 |
| GO:0003959 | NADPH dehydrogenase activity,GOslim:molecular_function | 0.001411112 | 0.019494262 |
| GO:0019253 | reductive pentose-phosphate cycle,GOslim:biological_process | 0.001612557 | 0.020619654 |
| GO:0005507 | copper ion binding,GOslim:molecular_function | 0.001600534 | 0.020619654 |
| zma_M00172 | C4-dicarboxylic acid cycle, NADP - malic enzyme type | 0.00221668 | 0.02748317 |
| GO:0030060 | L-malate dehydrogenase activity,GOslim:molecular_function | 0.002417983 | 0.02748317 |
| GO:0016615 | malate dehydrogenase activity,GOslim:molecular_function | 0.002417983 | 0.02748317 |
| GO:0009693 | ethylene biosynthetic process,GOslim:biological_process | 0.002417983 | 0.02748317 |
| pathwayID:PWY-101 | photosynthesis light reactions | 0.003021678 | 0.03341663 |
| pathwayID:PWY-241 | C4 photosynthetic carbon assimilation cycle | 0.003222839 | 0.034703332 |
| zma_M00166 | Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P | 0.003423964 | 0.035923678 |
| GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity,GOslim:molecular_function | 0.003826109 | 0.038184718 |
| GO:0008266 | poly(U) RNA binding,GOslim:molecular_function | 0.003826109 | 0.038184718 |
| pathwayID:CYSTSYN-PWY | cysteine biosynthesis I | 0.004027127 | 0.03832155 |
| GO:0016070 | RNA metabolic process,GOslim:biological_process | 0.004027127 | 0.03832155 |
| GO:0044262 | cellular carbohydrate metabolic process,GOslim:biological_process | 0.004429059 | 0.039641746 |
| GO:0006108 | malate metabolic process,GOslim:biological_process | 0.004429059 | 0.039641746 |
| GO:0005618 | cell wall,GOslim:cellular_component | 0.004456506 | 0.039641746 |
| zma_M00165 | Reductive pentose phosphate cycle (Calvin cycle) | 0.005634001 | 0.048027702 |
| GO:0042651 | thylakoid membrane,GOslim:cellular_component | 0.005634001 | 0.048027702 |
