PH01000000G1500's details annotation
1.Annotation
ICBR annotation: ubiquitin-conjugating enzyme, putative, expressed
Blast result AT3G57870 : 2.20E-57
Blast annotation: sumo conjugation enzyme 1
2.Location
Scaffold: PH01000000
Strand: +
| Region | Start | End |
| gene | 937656 | 941302 |
| mRNA | 937656 | 941302 |
| exon | 937656 | 938687 |
| exon | 940336 | 940482 |
| exon | 940578 | 940691 |
| exon | 940810 | 941302 |
| CDS | 938277 | 938687 |
| CDS | 940336 | 940482 |
| CDS | 940578 | 940691 |
| CDS | 940810 | 940872 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00179.25 | UQ_con | 81 | 194 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016881 | acid-amino acid ligase activity |
| GO:0019789 | SUMO ligase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.