PH01000000G2700's details annotation
1.Annotation
ICBR annotation: uncharacterized membrane protein, putative, expressed
Blast result AT1G63010 : 6.60E-75
Blast annotation: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
2.Location
Scaffold: PH01000000
Strand: -
| Region | Start | End |
| gene | 1669822 | 1674110 |
| mRNA | 1669822 | 1674110 |
| exon | 1669822 | 1671157 |
| exon | 1671206 | 1671218 |
| exon | 1671727 | 1671860 |
| exon | 1672169 | 1672359 |
| exon | 1672810 | 1672976 |
| exon | 1673152 | 1674110 |
| CDS | 1671007 | 1671157 |
| CDS | 1671206 | 1671218 |
| CDS | 1671727 | 1671860 |
| CDS | 1672169 | 1672359 |
| CDS | 1672810 | 1672976 |
| CDS | 1673152 | 1673347 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.