PH01000001G1770's details annotation
1.Annotation
ICBR annotation: peroxisomal biogenesis factor 11, putative, expressed
Blast result AT3G47430 : 2.60E-80
Blast annotation: peroxin 11B
2.Location
Scaffold: PH01000001
Strand: -
| Region | Start | End |
| gene | 1204151 | 1205840 |
| mRNA | 1204151 | 1205840 |
| exon | 1204151 | 1205840 |
| CDS | 1204802 | 1205470 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000676 | TKL-Pl-4 (from iTAK) integral_component_of_peroxisomal_membrane peroxisome_fission translational initiation, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05648.13 | PEX11 | 7 | 220 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005779 | integral to peroxisomal membrane |
| GO:0016559 | peroxisome fission |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.