PH01000002G2210's details annotation
1.Annotation
ICBR annotation: OsFBX32 - F-box domain containing protein, expressed
Blast result AT1G27340 : 4.00E-149
Blast annotation: Galactose oxidase/kelch repeat superfamily protein
2.Location
Scaffold: PH01000002
Strand: -
| Region | Start | End |
| gene | 1595463 | 1600262 |
| mRNA | 1595463 | 1600262 |
| exon | 1595463 | 1597933 |
| exon | 1599096 | 1599130 |
| exon | 1599974 | 1600262 |
| CDS | 1596691 | 1597933 |
| CDS | 1599096 | 1599130 |
| CDS | 1599974 | 1600012 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00646.32 | F-box | 94 | 129 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.