PH01000002G3370's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G19340 : 0.00E+00
Blast annotation: Protein of unknown function (DUF3754)
2.Location
Scaffold: PH01000002
Strand: +
| Region | Start | End |
| gene | 2368119 | 2375743 |
| mRNA | 2368119 | 2375743 |
| exon | 2368119 | 2368618 |
| exon | 2369464 | 2369558 |
| exon | 2370190 | 2370303 |
| exon | 2370450 | 2370554 |
| exon | 2370646 | 2370717 |
| exon | 2371120 | 2371232 |
| exon | 2371317 | 2371451 |
| exon | 2371546 | 2371614 |
| exon | 2371822 | 2371956 |
| exon | 2372247 | 2372334 |
| exon | 2372435 | 2372506 |
| exon | 2372584 | 2372684 |
| exon | 2372892 | 2373009 |
| exon | 2373120 | 2373179 |
| exon | 2373279 | 2373389 |
| exon | 2373559 | 2373633 |
| exon | 2373959 | 2373992 |
| exon | 2374546 | 2374712 |
| exon | 2374841 | 2374895 |
| exon | 2375022 | 2375090 |
| exon | 2375230 | 2375288 |
| exon | 2375394 | 2375743 |
| CDS | 2368504 | 2368618 |
| CDS | 2369464 | 2369558 |
| CDS | 2370190 | 2370303 |
| CDS | 2370450 | 2370554 |
| CDS | 2370646 | 2370717 |
| CDS | 2371120 | 2371232 |
| CDS | 2371317 | 2371451 |
| CDS | 2371546 | 2371614 |
| CDS | 2371822 | 2371956 |
| CDS | 2372247 | 2372334 |
| CDS | 2372435 | 2372506 |
| CDS | 2372584 | 2372684 |
| CDS | 2372892 | 2373009 |
| CDS | 2373120 | 2373179 |
| CDS | 2373279 | 2373389 |
| CDS | 2373559 | 2373633 |
| CDS | 2373959 | 2373992 |
| CDS | 2374546 | 2374712 |
| CDS | 2374841 | 2374895 |
| CDS | 2375022 | 2375090 |
| CDS | 2375230 | 2375288 |
| CDS | 2375394 | 2375624 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12576.7 | DUF3754 | 265 | 431 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.