PH01000003G2120's details annotation
1.Annotation
ICBR annotation: kinase, pfkB family, putative, expressed
Blast result AT4G10260 : 2.00E-138
Blast annotation: pfkB-like carbohydrate kinase family protein
2.Location
Scaffold: PH01000003
Strand: -
| Region | Start | End |
| gene | 1397009 | 1399518 |
| mRNA | 1397009 | 1399518 |
| exon | 1397009 | 1397273 |
| exon | 1399204 | 1399518 |
| CDS | 1397139 | 1397273 |
| CDS | 1399204 | 1399413 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00294.23 | PfkB | 16 | 321 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Fructose and mannose metabolism | fructokinase [EC:2.7.1.4] | ko00051 | K00847 |
| Starch and sucrose metabolism | fructokinase [EC:2.7.1.4] | ko00500 | K00847 |
| Amino sugar and nucleotide sugar metabolism | fructokinase [EC:2.7.1.4] | ko00520 | K00847 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.