PH01000004G4470's details annotation
1.Annotation
ICBR annotation: transporter, major facilitator family, putative, expressed
Blast result AT3G46980 : 2.00E-167
Blast annotation: phosphate transporter 4;3
2.Location
Scaffold: PH01000004
Strand: +
| Region | Start | End |
| gene | 2858199 | 2861741 |
| mRNA | 2858199 | 2861741 |
| exon | 2858199 | 2858722 |
| exon | 2859206 | 2859432 |
| exon | 2859568 | 2859856 |
| exon | 2860036 | 2860080 |
| exon | 2860194 | 2860340 |
| exon | 2860874 | 2861011 |
| exon | 2861122 | 2861155 |
| exon | 2861242 | 2861741 |
| CDS | 2858309 | 2858722 |
| CDS | 2859206 | 2859432 |
| CDS | 2859568 | 2859856 |
| CDS | 2860036 | 2860080 |
| CDS | 2860194 | 2860340 |
| CDS | 2860874 | 2861011 |
| CDS | 2861122 | 2861155 |
| CDS | 2861242 | 2861426 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07690.15 | MFS_1 | 104 | 445 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
| GO:0055085 | transmembrane transport |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.