PH01000005G1230's details annotation
1.Annotation
ICBR annotation: TKL_IRAK_C-LEC.1 - TKL_IRAK_C-LEC has homology to C-type lectin receptors, expressed
Blast result AT1G52310 : 0.00E+00
Blast annotation: protein kinase family protein / C-type lectin domain-containing protein
2.Location
Scaffold: PH01000005
Strand: +
| Region | Start | End |
| gene | 801438 | 807482 |
| mRNA | 801438 | 807482 |
| exon | 801438 | 803106 |
| exon | 803873 | 804298 |
| exon | 804404 | 804971 |
| exon | 805822 | 806386 |
| exon | 806460 | 807482 |
| CDS | 803022 | 803106 |
| CDS | 803873 | 804298 |
| CDS | 804404 | 804971 |
| CDS | 805822 | 806386 |
| CDS | 806460 | 806582 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00059.20 | Lectin_C | 51 | 167 |
| PF07714.16 | Pkinase_Tyr | 270 | 519 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004713 | protein tyrosine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
| GO:0030246 | carbohydrate binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.