PH01000006G0460's details annotation
1.Annotation
ICBR annotation: ureide permease, putative, expressed
Blast result AT2G03530 : 5.00E-163
Blast annotation: ureide permease 2
2.Location
Scaffold: PH01000006
Strand: -
| Region | Start | End |
| gene | 317816 | 321808 |
| mRNA | 317816 | 321808 |
| exon | 317816 | 318160 |
| exon | 318386 | 318760 |
| exon | 318929 | 319038 |
| exon | 319123 | 319166 |
| exon | 319342 | 319510 |
| exon | 320136 | 320274 |
| exon | 320370 | 320660 |
| exon | 321182 | 321808 |
| CDS | 318002 | 318160 |
| CDS | 318386 | 318760 |
| CDS | 318929 | 319038 |
| CDS | 319123 | 319166 |
| CDS | 319342 | 319510 |
| CDS | 320136 | 320274 |
| CDS | 320370 | 320660 |
| CDS | 321182 | 321229 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07168.10 | Ureide_permease | 75 | 437 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.