PH01000006G2190's details annotation
1.Annotation
ICBR annotation: flavin monooxygenase, putative, expressed
Blast result AT5G25620 : 7.00E-116
Blast annotation: Flavin-binding monooxygenase family protein
2.Location
Scaffold: PH01000006
Strand: +
| Region | Start | End |
| gene | 1460618 | 1467760 |
| mRNA | 1460618 | 1467760 |
| exon | 1460618 | 1461330 |
| exon | 1461423 | 1461834 |
| exon | 1463360 | 1463613 |
| exon | 1463907 | 1464057 |
| exon | 1466744 | 1467760 |
| CDS | 1460999 | 1461330 |
| CDS | 1461423 | 1461834 |
| CDS | 1463360 | 1463613 |
| CDS | 1463907 | 1464057 |
| CDS | 1466744 | 1466977 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13450.5 | NAD_binding_8 | 73 | 110 |
| PF00743.18 | FMO-like | 175 | 379 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004499 | N,N-dimethylaniline monooxygenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0050661 | NADP binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.