PH01000007G3570's details annotation
1.Annotation
ICBR annotation: heat shock protein DnaJ, putative, expressed
Blast result AT3G17830 : 1.50E-41
Blast annotation: Molecular chaperone Hsp40/DnaJ family protein
2.Location
Scaffold: PH01000007
Strand: -
| Region | Start | End |
| gene | 2343570 | 2346975 |
| mRNA | 2343570 | 2346975 |
| exon | 2343570 | 2344546 |
| exon | 2344820 | 2344913 |
| exon | 2345031 | 2345083 |
| exon | 2345568 | 2345728 |
| exon | 2345933 | 2346062 |
| exon | 2346529 | 2346975 |
| CDS | 2344327 | 2344546 |
| CDS | 2344820 | 2344913 |
| CDS | 2345031 | 2345083 |
| CDS | 2345568 | 2345728 |
| CDS | 2345933 | 2346062 |
| CDS | 2346529 | 2346542 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001865 | mitochondrial respiratory chain complex IV, mitochondrial inner membrane, cytochrome-c oxidase activity, Oxidative_phosphorylation |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01556.17 | DnaJ_C | 7 | 98 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006457 | protein folding |
| GO:0051082 | unfolded protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.