PH01000010G3180's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G36895 : 1.50E-70
Blast annotation: -
2.Location
Scaffold: PH01000010
Strand: -
| Region | Start | End |
| gene | 2225921 | 2230043 |
| mRNA | 2225921 | 2230043 |
| exon | 2225921 | 2226728 |
| exon | 2227797 | 2227898 |
| exon | 2229275 | 2229375 |
| exon | 2229589 | 2230043 |
| CDS | 2226558 | 2226728 |
| CDS | 2227797 | 2227898 |
| CDS | 2229275 | 2229375 |
| CDS | 2229589 | 2229820 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001244 | iron-sulfur cluster assembly, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.