Gene details

Annotation of co-expression genes

PH01000011G1530's details annotation

1.Annotation

ICBR annotation: serine/threonine-protein kinase, putative, expressed

Blast result AT1G54820 : 3.00E-103
Blast annotation: Protein kinase superfamily protein

2.Location

Scaffold: PH01000011
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000529	RLK-Pelle_Extensin (from iTAK) RLK-Pelle_RLCK-XIII (from iTAK)
coexpression network	CFinderM000689	hydrolase activity, acting on ester bonds, lipid metabolic process, hydrolase activity, RLK-Pelle_Extensin (from iTAK) lipase activity, lipid transport,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF07714.16	Pkinase_Tyr	235	483

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0004672	protein kinase activity
GO:0004674	protein serine/threonine kinase activity
GO:0005524	ATP binding
GO:0006468	protein phosphorylation
GO:0016772	transferase activity, transferring phosphorus-containing groups

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.