PH01000012G0830's details annotation
1.Annotation
ICBR annotation: remorin C-terminal domain containing protein, putative, expressed
Blast result AT5G23750 : 3.60E-34
Blast annotation: Remorin family protein
2.Location
Scaffold: PH01000012
Strand: -
| Region | Start | End |
| gene | 542414 | 546767 |
| mRNA | 542414 | 546767 |
| exon | 542414 | 543676 |
| exon | 543836 | 543917 |
| exon | 544355 | 544442 |
| exon | 544533 | 544574 |
| exon | 545250 | 546767 |
| CDS | 543473 | 543676 |
| CDS | 543836 | 543917 |
| CDS | 544355 | 544442 |
| CDS | 544533 | 544574 |
| CDS | 545250 | 545382 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03766.12 | Remorin_N | 21 | 65 |
| PF03763.12 | Remorin_C | 70 | 174 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.