PH01000012G1900's details annotation
1.Annotation
ICBR annotation: dehydration response related protein, putative, expressed
Blast result AT1G33170 : 0.00E+00
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
2.Location
Scaffold: PH01000012
Strand: +
| Region | Start | End |
| gene | 1234883 | 1240621 |
| mRNA | 1234883 | 1240621 |
| exon | 1234883 | 1236714 |
| exon | 1236786 | 1236996 |
| exon | 1237111 | 1237408 |
| exon | 1237497 | 1237961 |
| exon | 1239812 | 1240621 |
| CDS | 1236019 | 1236714 |
| CDS | 1236786 | 1236996 |
| CDS | 1237111 | 1237408 |
| CDS | 1237497 | 1237961 |
| CDS | 1239812 | 1240037 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03141.15 | Methyltransf_29 | 110 | 620 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.