PH01000015G0540's details annotation
1.Annotation
ICBR annotation: Ser/Thr protein kinase, putative, expressed
Blast result AT1G67000 : 7.70E-97
Blast annotation: Protein kinase superfamily protein
2.Location
Scaffold: PH01000015
Strand: +
| Region | Start | End |
| gene | 325474 | 337682 |
| mRNA | 325474 | 337682 |
| exon | 325474 | 327781 |
| exon | 328932 | 329016 |
| exon | 331130 | 331625 |
| exon | 332925 | 332960 |
| exon | 336302 | 337345 |
| exon | 337550 | 337682 |
| CDS | 327639 | 327781 |
| CDS | 328932 | 329016 |
| CDS | 331130 | 331625 |
| CDS | 332925 | 332960 |
| CDS | 336302 | 337345 |
| CDS | 337550 | 337632 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14380.5 | WAK_assoc | 167 | 234 |
| PF00069.24 | Pkinase | 324 | 594 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.