PH01000017G0950's details annotation 1.Annotation ICBR annotation: AP2 domain containing protein, expressed
Blast result AT5G52020 : 1.80E-28 Blast annotation: Integrase-type DNA-binding superfamily protein 2.Location Scaffold: PH01000017 Strand: - Region | Start | End | gene | 710292 | 711678 | mRNA | 710292 | 711678 | exon | 710292 | 711678 | CDS | 710983 | 711552 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000467 | response to desiccation, regulation of transcription, DNA-dependent, C2C2-Dof Transcription_Regulator(from iTAK) Dof Transcription_Regulator(from PlantTFDB) ERF Transcription_Regulator(from PlantTFDB) AP2/ERF-ERF Transcription_Regulator(from iTAK)
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | Transcription_Regulator(from iTAK) | AP2/ERF-ERF | Transcription_Regulator(from PlantTFDB) | ERF |
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00847.19 | AP2 | 23 | 72 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003677 | DNA binding | GO:0003700 | sequence-specific DNA binding transcription factor activity | GO:0006355 | regulation of transcription, DNA-dependent |
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