PH01000017G1130's details annotation
1.Annotation
ICBR annotation: cyclin-like F-box, putative, expressed
Blast result AT4G00755 : 2.20E-57
Blast annotation: F-box family protein
2.Location
Scaffold: PH01000017
Strand: -
| Region | Start | End |
| gene | 799725 | 804527 |
| mRNA | 799725 | 804527 |
| exon | 799725 | 801684 |
| exon | 802145 | 802263 |
| exon | 802840 | 803018 |
| exon | 803108 | 803533 |
| exon | 804048 | 804527 |
| CDS | 801396 | 801684 |
| CDS | 802145 | 802263 |
| CDS | 802840 | 803018 |
| CDS | 803108 | 803533 |
| CDS | 804048 | 804228 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000520 | ER_membrane_protein_complex GT96 GlycosylTransferases TKL-Pl-4 (from iTAK) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.