Annotation of co-expression genes

PH01000018G1810's details annotation

1.Annotation

ICBR annotation: UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed

Blast result AT4G15550 : 4.50E-69
Blast annotation: indole-3-acetate beta-D-glucosyltransferase

2.Location

Scaffold: PH01000018
Strand: -

RegionStartEnd
gene11046581107599
mRNA11046581107599
exon11046581104756
exon11048541104939
exon11053071107599
CDS11047481104756
CDS11048541104939
CDS11053071106555

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF00201.17UDPGT289416

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
Pentose and glucuronate interconversionsglucuronosyltransferase [EC:2.4.1.17]ko00040K00699
Ascorbate and aldarate metabolismglucuronosyltransferase [EC:2.4.1.17]ko00053K00699
Starch and sucrose metabolismglucuronosyltransferase [EC:2.4.1.17]ko00500K00699
Steroid hormone biosynthesisglucuronosyltransferase [EC:2.4.1.17]ko00140K00699
Retinol metabolismglucuronosyltransferase [EC:2.4.1.17]ko00830K00699
Porphyrin and chlorophyll metabolismglucuronosyltransferase [EC:2.4.1.17]ko00860K00699
Metabolism of xenobiotics by cytochrome P450glucuronosyltransferase [EC:2.4.1.17]ko00980K00699
Drug metabolism - cytochrome P450glucuronosyltransferase [EC:2.4.1.17]ko00982K00699
Drug metabolism - other enzymesglucuronosyltransferase [EC:2.4.1.17]ko00983K00699

10.Gene Ontology

GO AccessionGO Annotation
GO:0008152metabolic process
GO:0016758transferase activity, transferring hexosyl groups

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.