PH01000023G1730's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G44760 : 1.00E-52
Blast annotation: Domain of unknown function (DUF3598)
2.Location
Scaffold: PH01000023
Strand: +
| Region | Start | End |
| gene | 1099377 | 1106490 |
| mRNA | 1099377 | 1106490 |
| exon | 1099377 | 1101894 |
| exon | 1102460 | 1102504 |
| exon | 1102835 | 1102974 |
| exon | 1103808 | 1104100 |
| exon | 1105141 | 1106490 |
| CDS | 1101649 | 1101894 |
| CDS | 1102460 | 1102504 |
| CDS | 1102835 | 1102974 |
| CDS | 1103808 | 1104100 |
| CDS | 1105141 | 1105175 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.