PH01000024G0160's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G28910 : 2.60E-46
Blast annotation: novel interactor of JAZ
2.Location
Scaffold: PH01000024
Strand: -
| Region | Start | End |
| gene | 137251 | 140921 |
| mRNA | 137251 | 140921 |
| exon | 137251 | 138602 |
| exon | 139086 | 140921 |
| CDS | 138241 | 138602 |
| CDS | 139086 | 140160 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07897.10 | EAR | 2 | 44 |
| PF16135.4 | Jas | 429 | 452 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.