Gene details

Annotation of co-expression genes

PH01000024G1490's details annotation

1.Annotation

ICBR annotation: ATP synthase, putative, expressed

Blast result AT5G08690 : 0.00E+00
Blast annotation: ATP synthase alpha/beta family protein

2.Location

Scaffold: PH01000024
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001606	LIM Transcription_Regulator(from iTAK) mitochondrial proton-transporting ATP synthase complex, catalytic core F(1), proton-transporting two-sector ATPase complex, catalytic domain, proton-transporting ATP synthase complex, catalytic core F(1), ATP biosynthetic process, ATP metabolic process, ATP_catabolic_process actin cytoskeleton organization, proton transport, ATP synthesis coupled proton transport, ATP hydrolysis coupled proton transport, Phagosome Oxidative_phosphorylation
coexpression network	CFinderM001766	proton-transporting ATP synthase complex, catalytic core F(1), mitochondrial proton-transporting ATP synthase complex, catalytic core F(1), proton-transporting two-sector ATPase complex, catalytic domain, mitochondrial outer membrane, ATP metabolic process, anion transport, ATP biosynthetic process, ATP_catabolic_process regulation_of_anion_transport proton transport, ATP synthesis coupled proton transport, fructose-bisphosphate aldolase activity, voltage-gated anion channel activity, ATP hydrolysis coupled proton transport, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, hydrogen ion transporting ATP synthase activity, rotational mechanism,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Oxidative phosphorylation	F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]	ko00190	K02133

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
GO:0005524	ATP binding
GO:0006200	ATP catabolic process
GO:0006754	ATP biosynthetic process
GO:0015986	ATP synthesis coupled proton transport
GO:0015991	ATP hydrolysis coupled proton transport
GO:0015992	proton transport
GO:0016820	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0016887	ATPase activity
GO:0017111	nucleoside-triphosphatase activity
GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain
GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046034	ATP metabolic process
GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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