PH01000026G0130's details annotation
1.Annotation
ICBR annotation: UDP-glucuronate 4-epimerase, putative, expressed
Blast result AT4G30440 : 5.60E-88
Blast annotation: UDP-D-glucuronate 4-epimerase 1
2.Location
Scaffold: PH01000026
Strand: +
| Region | Start | End |
| gene | 87612 | 89837 |
| mRNA | 87612 | 89837 |
| exon | 87612 | 88617 |
| exon | 89404 | 89837 |
| CDS | 87961 | 88617 |
| CDS | 89404 | 89496 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF16363.4 | GDP_Man_Dehyd | 101 | 213 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0044237 | cellular metabolic process |
| GO:0050662 | coenzyme binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.