PH01000026G2170's details annotation
1.Annotation
ICBR annotation: ENTH domain containing protein, expressed
Blast result AT2G43160 : 1.00E-134
Blast annotation: ENTH/VHS family protein
2.Location
Scaffold: PH01000026
Strand: -
| Region | Start | End |
| gene | 1555813 | 1567306 |
| mRNA | 1555813 | 1567306 |
| exon | 1555813 | 1556173 |
| exon | 1556377 | 1556508 |
| exon | 1557100 | 1557141 |
| exon | 1558651 | 1559044 |
| exon | 1561649 | 1562150 |
| exon | 1562237 | 1563203 |
| exon | 1563616 | 1563815 |
| exon | 1564031 | 1564215 |
| exon | 1564285 | 1564380 |
| exon | 1564468 | 1564509 |
| exon | 1564675 | 1565031 |
| exon | 1565142 | 1565287 |
| exon | 1565415 | 1565498 |
| exon | 1565625 | 1565703 |
| exon | 1565793 | 1565872 |
| exon | 1566030 | 1566081 |
| exon | 1566202 | 1567306 |
| CDS | 1556030 | 1556173 |
| CDS | 1556377 | 1556508 |
| CDS | 1557100 | 1557141 |
| CDS | 1558651 | 1559044 |
| CDS | 1561649 | 1562150 |
| CDS | 1562237 | 1563203 |
| CDS | 1563616 | 1563815 |
| CDS | 1564031 | 1564215 |
| CDS | 1564285 | 1564380 |
| CDS | 1564468 | 1564509 |
| CDS | 1564675 | 1565031 |
| CDS | 1565142 | 1565287 |
| CDS | 1565415 | 1565498 |
| CDS | 1565625 | 1565703 |
| CDS | 1565793 | 1565872 |
| CDS | 1566030 | 1566081 |
| CDS | 1566202 | 1566236 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000490 | HB-other Transcription_Regulator(from PlantTFDB) Mismatch_repair DNA_replication Homologous_recombination Nucleotide_excision_repair Endocytosis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01417.19 | ENTH | 26 | 145 |
| PF00149.27 | Metallophos | 944 | 1074 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Endocytosis | epsin | ko04144 | K12471 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016787 | hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.