Gene details

Annotation of co-expression genes

PH01000028G1790's details annotation

1.Annotation

ICBR annotation: white-brown complex homolog protein 11, putative, expressed

Blast result AT1G17840 : 0.00E+00
Blast annotation: white-brown complex homolog protein 11

2.Location

Scaffold: PH01000028
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000321	Biosynthesis_of_siderophore_group_nonribosomal_peptides isochorismate synthase activity, Fatty_acid_biosynthesis Ubiquinone_and_other_terpenoid-quinone_biosynthesis thiolester_hydrolase_activity
coexpression network	CFinderM000926	strictosidine synthase activity, ATPase activity, biosynthetic process, transcription_corepressor_activity nucleoside-triphosphatase activity, peroxisomal membrane, protein_import_into_peroxisome_matrix negative_regulation_of_transcription,_DNA-templated response to hormone stimulus, nucleotide binding,
coexpression network	CFinderM000955	Biosynthesis_of_siderophore_group_nonribosomal_peptides GATA Transcription_Regulator(from PlantTFDB) C2C2-GATA Transcription_Regulator(from iTAK) Ubiquinone_and_other_terpenoid-quinone_biosynthesis isochorismate synthase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0005524	ATP binding
GO:0016020	membrane
GO:0016887	ATPase activity
GO:0017111	nucleoside-triphosphatase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.