PH01000031G1210's details annotation
1.Annotation
ICBR annotation: fructose-bisphospate aldolase isozyme, putative, expressed
Blast result AT2G36460 : 2.00E-170
Blast annotation: Aldolase superfamily protein
2.Location
Scaffold: PH01000031
Strand: -
| Region | Start | End |
| gene | 729569 | 732030 |
| mRNA | 729569 | 732030 |
| exon | 729569 | 730950 |
| exon | 731728 | 732030 |
| CDS | 729902 | 730950 |
| CDS | 731728 | 731755 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001238 | glycolysis, fructose-bisphosphate aldolase activity, Fructose_and_mannose_metabolism Methane_metabolism Carbon_fixation_in_photosynthetic_organisms Glycolysis_/_Gluconeogenesis Pentose_phosphate_pathway |
| coexpression network | CFinderM001316 | SNF2 Transcription_Regulator(from iTAK) helicase activity, ATP-dependent helicase activity, ATP binding, monooxygenase activity, fructose-bisphosphate aldolase activity, DNA binding, protein catabolic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00274.18 | Glycolytic | 11 | 358 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glycolysis / Gluconeogenesis | fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | ko00010 | K01623 |
| Pentose phosphate pathway | fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | ko00030 | K01623 |
| Fructose and mannose metabolism | fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | ko00051 | K01623 |
| Carbon fixation in photosynthetic organisms | fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | ko00710 | K01623 |
| Methane metabolism | fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | ko00680 | K01623 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0004332 | fructose-bisphosphate aldolase activity |
| GO:0006096 | glycolysis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.