PH01000032G0710's details annotation
1.Annotation
ICBR annotation: OsPOP4 - Putative Prolyl Oligopeptidase homologue, expressed
Blast result AT2G23620 : 1.90E-64
Blast annotation: methyl esterase 1
2.Location
Scaffold: PH01000032
Strand: +
| Region | Start | End |
| gene | 406099 | 409277 |
| mRNA | 406099 | 409277 |
| exon | 406099 | 406532 |
| exon | 406767 | 406901 |
| exon | 408041 | 409277 |
| CDS | 406155 | 406532 |
| CDS | 406767 | 406901 |
| CDS | 408041 | 408322 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000374 | AUX/IAA Transcription_Regulator(from iTAK) GT8 GlycosylTransferases Drug_metabolism_-_cytochrome_P450 Metabolism_of_xenobiotics_by_cytochrome_P450 Glutathione_metabolism |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12697.6 | Abhydrolase_6 | 12 | 253 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.