PH01000033G2310's details annotation
1.Annotation
ICBR annotation: IN2-1 protein, putative, expressed
Blast result AT5G02780 : 1.90E-44
Blast annotation: glutathione transferase lambda 1
2.Location
Scaffold: PH01000033
Strand: +
| Region | Start | End |
| gene | 1499106 | 1502241 |
| mRNA | 1499106 | 1502241 |
| exon | 1499106 | 1501067 |
| exon | 1501187 | 1501285 |
| exon | 1501396 | 1501504 |
| exon | 1501617 | 1501693 |
| exon | 1501798 | 1502241 |
| CDS | 1500951 | 1501067 |
| CDS | 1501187 | 1501285 |
| CDS | 1501396 | 1501504 |
| CDS | 1501617 | 1501693 |
| CDS | 1501798 | 1502025 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13417.5 | GST_N_3 | 6 | 35 |
| PF13410.5 | GST_C_2 | 74 | 138 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.