PH01000036G0260's details annotation
1.Annotation
ICBR annotation: monogalactosyldiacylglycerol synthase, putative, expressed
Blast result AT5G20410 : 1.00E-166
Blast annotation: monogalactosyldiacylglycerol synthase 2
2.Location
Scaffold: PH01000036
Strand: +
| Region | Start | End |
| gene | 153444 | 158707 |
| mRNA | 153444 | 158707 |
| exon | 153444 | 154091 |
| exon | 154205 | 154377 |
| exon | 156618 | 156779 |
| exon | 156907 | 157048 |
| exon | 157306 | 157530 |
| exon | 157804 | 157896 |
| exon | 158360 | 158707 |
| CDS | 153717 | 154091 |
| CDS | 154205 | 154377 |
| CDS | 156618 | 156779 |
| CDS | 156907 | 157048 |
| CDS | 157306 | 157530 |
| CDS | 157804 | 157896 |
| CDS | 158360 | 158647 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06925.10 | MGDG_synth | 105 | 273 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0009247 | glycolipid biosynthetic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.