PH01000041G0130's details annotation
1.Annotation
ICBR annotation: diacylglycerol kinase, putative, expressed
Blast result AT4G21540 : 1.40E-35
Blast annotation: sphingosine kinase 1
2.Location
Scaffold: PH01000041
Strand: +
| Region | Start | End |
| gene | 89672 | 96649 |
| mRNA | 89672 | 96649 |
| exon | 89672 | 91617 |
| exon | 92154 | 92254 |
| exon | 92958 | 93107 |
| exon | 93201 | 93236 |
| exon | 93777 | 93853 |
| exon | 95146 | 95267 |
| exon | 95391 | 95491 |
| exon | 95644 | 95725 |
| exon | 95887 | 95973 |
| exon | 96307 | 96649 |
| CDS | 91461 | 91617 |
| CDS | 92154 | 92254 |
| CDS | 92958 | 93107 |
| CDS | 93201 | 93236 |
| CDS | 93777 | 93853 |
| CDS | 95146 | 95267 |
| CDS | 95391 | 95491 |
| CDS | 95644 | 95725 |
| CDS | 95887 | 95973 |
| CDS | 96307 | 96395 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00781.23 | DAGK_cat | 194 | 311 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003951 | NAD+ kinase activity |
| GO:0004143 | diacylglycerol kinase activity |
| GO:0007205 | protein kinase C-activating G-protein coupled receptor signaling pathway |
| GO:0008152 | metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.