PH01000041G1200's details annotation
1.Annotation
ICBR annotation: pathogenesis-related Bet v I family protein, putative, expressed
Blast result AT1G24020 : 3.10E-34
Blast annotation: MLP-like protein 423
2.Location
Scaffold: PH01000041
Strand: -
| Region | Start | End |
| gene | 807524 | 808399 |
| mRNA | 807524 | 808399 |
| exon | 807524 | 808041 |
| exon | 808119 | 808399 |
| CDS | 807764 | 808041 |
| CDS | 808119 | 808299 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00407.18 | Bet_v_1 | 3 | 152 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006952 | defense response |
| GO:0009607 | response to biotic stimulus |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.