PH01000044G0140's details annotation
1.Annotation
ICBR annotation: PDI, putative, expressed
Blast result AT1G60420 : 0.00E+00
Blast annotation: DC1 domain-containing protein
2.Location
Scaffold: PH01000044
Strand: +
| Region | Start | End |
| gene | 95466 | 99827 |
| mRNA | 95466 | 99827 |
| exon | 95466 | 95719 |
| exon | 96633 | 97118 |
| exon | 97209 | 97697 |
| exon | 98288 | 99827 |
| CDS | 95630 | 95719 |
| CDS | 96633 | 97118 |
| CDS | 97209 | 97697 |
| CDS | 98288 | 98953 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13905.5 | Thioredoxin_8 | 40 | 133 |
| PF13905.5 | Thioredoxin_8 | 200 | 292 |
| PF13905.5 | Thioredoxin_8 | 363 | 456 |
| PF03107.15 | C1_2 | 502 | 544 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0045454 | cell redox homeostasis |
| GO:0047134 | protein-disulfide reductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.