Annotation of co-expression genes

PH01000044G1500's details annotation

1.Annotation

ICBR annotation: ATP binding protein, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000044
Strand: +

RegionStartEnd
gene10935471099047
mRNA10935471099047
exon10935471094786
exon10952651095619
exon10959351096135
exon10983431099047
CDS10946831094786
CDS10952651095619
CDS10959351096135
CDS10983431098729

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.