PH01000045G0170's details annotation
1.Annotation
ICBR annotation: CAMK_CAMK_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Blast result AT1G01920 : 2.70E-52
Blast annotation: SET domain-containing protein
2.Location
Scaffold: PH01000045
Strand: +
| Region | Start | End |
| gene | 108807 | 110740 |
| mRNA | 108807 | 110740 |
| exon | 108807 | 109012 |
| exon | 109089 | 109185 |
| exon | 109264 | 109438 |
| exon | 109535 | 109640 |
| exon | 109736 | 109815 |
| exon | 110296 | 110740 |
| CDS | 108953 | 109012 |
| CDS | 109089 | 109185 |
| CDS | 109264 | 109438 |
| CDS | 109535 | 109640 |
| CDS | 109736 | 109815 |
| CDS | 110296 | 110380 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.