PH01000045G1570's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000045
Strand: -
| Region | Start | End |
| gene | 1001122 | 1007872 |
| mRNA | 1001122 | 1007872 |
| exon | 1001122 | 1001768 |
| exon | 1002528 | 1002576 |
| exon | 1002813 | 1002914 |
| exon | 1005541 | 1005630 |
| exon | 1005741 | 1005860 |
| exon | 1006426 | 1006541 |
| exon | 1006915 | 1007023 |
| exon | 1007594 | 1007872 |
| CDS | 1001602 | 1001768 |
| CDS | 1002528 | 1002576 |
| CDS | 1002813 | 1002914 |
| CDS | 1005541 | 1005630 |
| CDS | 1005741 | 1005860 |
| CDS | 1006426 | 1006541 |
| CDS | 1006915 | 1007023 |
| CDS | 1007594 | 1007827 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005525 | GTP binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.