PH01000046G0310's details annotation
1.Annotation
ICBR annotation: OsGrx_I1 - glutaredoxin subgroup III, expressed
Blast result AT1G28480 : 2.80E-23
Blast annotation: Thioredoxin superfamily protein
2.Location
Scaffold: PH01000046
Strand: +
| Region | Start | End |
| gene | 254856 | 255480 |
| mRNA | 254856 | 255480 |
| exon | 254856 | 255480 |
| CDS | 254962 | 255384 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000612 | photosystem II, extrinsic to membrane, oxygen evolving complex, RLK-Pelle_DLSV (from iTAK) ubiquitin ligase complex, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00462.23 | Glutaredoxin | 56 | 112 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0009055 | electron carrier activity |
| GO:0015035 | protein disulfide oxidoreductase activity |
| GO:0045454 | cell redox homeostasis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.