Gene details

Annotation of co-expression genes

PH01000047G0740's details annotation

1.Annotation

ICBR annotation: seven in absentia protein family domain containing protein, expressed

Blast result AT3G61790 : 5.10E-69
Blast annotation: Protein with RING/U-box and TRAF-like domains

2.Location

Scaffold: PH01000047
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000310	Glycine,_serine_and_threonine_metabolism flavin adenine dinucleotide binding, oxidoreductase activity, acting on CH-OH group of donors, Biotin_metabolism oxidation-reduction process, alcohol metabolic process,
coexpression network	CFinderM001183	RLK-Pelle_LRR-VI-2 (from iTAK) multicellular organismal development, CAMK_CDPK (from iTAK)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF03145.15	Sina	1	126

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding
GO:0005634	nucleus
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0007275	multicellular organismal development

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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