PH01000053G2090's details annotation
1.Annotation
ICBR annotation: EMB2748, putative, expressed
Blast result AT1G04590 : 1.50E-61
Blast annotation: -
2.Location
Scaffold: PH01000053
Strand: +
| Region | Start | End |
| gene | 1206414 | 1213229 |
| mRNA | 1206414 | 1213229 |
| exon | 1206414 | 1208987 |
| exon | 1209768 | 1209808 |
| exon | 1211078 | 1211233 |
| exon | 1211885 | 1212028 |
| exon | 1212094 | 1212306 |
| exon | 1212474 | 1213229 |
| CDS | 1208828 | 1208987 |
| CDS | 1209768 | 1209808 |
| CDS | 1211078 | 1211233 |
| CDS | 1211885 | 1212028 |
| CDS | 1212094 | 1212306 |
| CDS | 1212474 | 1212683 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.