PH01000053G2150's details annotation
1.Annotation
ICBR annotation: glycosyl transferase, family 8, putative, expressed
Blast result AT2G38650 : 1.70E-31
Blast annotation: galacturonosyltransferase 7
2.Location
Scaffold: PH01000053
Strand: +
| Region | Start | End |
| gene | 1251461 | 1255570 |
| mRNA | 1251461 | 1255570 |
| exon | 1251461 | 1253018 |
| exon | 1253119 | 1253159 |
| exon | 1253254 | 1253313 |
| exon | 1254004 | 1254157 |
| exon | 1254265 | 1254317 |
| exon | 1255180 | 1255570 |
| CDS | 1252868 | 1253018 |
| CDS | 1253119 | 1253159 |
| CDS | 1253254 | 1253313 |
| CDS | 1254004 | 1254157 |
| CDS | 1254265 | 1254317 |
| CDS | 1255180 | 1255479 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.