PH01000057G0810's details annotation
1.Annotation
ICBR annotation: ATP/GTP binding protein, putative, expressed
Blast result AT5G10010 : 1.00E-101
Blast annotation: -
2.Location
Scaffold: PH01000057
Strand: -
| Region | Start | End |
| gene | 567058 | 578783 |
| mRNA | 567058 | 578783 |
| exon | 567058 | 567354 |
| exon | 567789 | 567829 |
| exon | 568483 | 568627 |
| exon | 568880 | 569083 |
| exon | 569551 | 569665 |
| exon | 570481 | 570593 |
| exon | 572433 | 572493 |
| exon | 572954 | 572958 |
| exon | 573045 | 573173 |
| exon | 573259 | 573306 |
| exon | 573421 | 573483 |
| exon | 573565 | 573603 |
| exon | 574650 | 574723 |
| exon | 575560 | 575618 |
| exon | 575766 | 575825 |
| exon | 575953 | 576077 |
| exon | 576884 | 576942 |
| exon | 577463 | 577526 |
| exon | 577617 | 577670 |
| exon | 577808 | 577846 |
| exon | 578546 | 578783 |
| CDS | 567187 | 567354 |
| CDS | 567789 | 567829 |
| CDS | 568483 | 568627 |
| CDS | 568880 | 569083 |
| CDS | 569551 | 569665 |
| CDS | 570481 | 570593 |
| CDS | 572433 | 572493 |
| CDS | 572954 | 572958 |
| CDS | 573045 | 573173 |
| CDS | 573259 | 573306 |
| CDS | 573421 | 573483 |
| CDS | 573565 | 573603 |
| CDS | 574650 | 574723 |
| CDS | 575560 | 575618 |
| CDS | 575766 | 575825 |
| CDS | 575953 | 576077 |
| CDS | 576884 | 576942 |
| CDS | 577463 | 577526 |
| CDS | 577617 | 577670 |
| CDS | 577808 | 577846 |
| CDS | 578546 | 578755 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06090.11 | Ins_P5_2-kin | 420 | 569 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
| GO:0035299 | inositol pentakisphosphate 2-kinase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.