PH01000057G1990's details annotation
1.Annotation
ICBR annotation: phosphatidylinositol 3- and 4-kinase family protein, putative, expressed
Blast result AT1G26270 : 0.00E+00
Blast annotation: Phosphatidylinositol 3- and 4-kinase family protein
2.Location
Scaffold: PH01000057
Strand: -
| Region | Start | End |
| gene | 1328889 | 1332463 |
| mRNA | 1328889 | 1332463 |
| exon | 1328889 | 1332463 |
| CDS | 1329126 | 1331012 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000848 | GT66 GlycosylTransferases phenylalanyl-tRNA aminoacylation, tRNA aminoacylation, oligosaccharyl transferase activity, phenylalanine-tRNA ligase activity, tRNA binding, protein glycosylation, Various_types_of_N-glycan_biosynthesis Aminoacyl-tRNA_biosynthesis N-Glycan_biosynthesis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00454.26 | PI3_PI4_kinase | 179 | 435 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.