PH01000058G1990's details annotation
1.Annotation
ICBR annotation: DUF630/DUF632 domains containing protein, putative, expressed
Blast result AT1G77500 : 7.60E-97
Blast annotation: Protein of unknown function (DUF630 and DUF632)
2.Location
Scaffold: PH01000058
Strand: +
| Region | Start | End |
| gene | 1231893 | 1235383 |
| mRNA | 1231893 | 1235383 |
| exon | 1231893 | 1232428 |
| exon | 1232574 | 1233519 |
| exon | 1233612 | 1233820 |
| exon | 1233923 | 1234146 |
| exon | 1234241 | 1235383 |
| CDS | 1232171 | 1232428 |
| CDS | 1232574 | 1233519 |
| CDS | 1233612 | 1233820 |
| CDS | 1233923 | 1234146 |
| CDS | 1234241 | 1235042 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04783.11 | DUF630 | 19 | 72 |
| PF04782.11 | DUF632 | 361 | 680 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.